search: "microscope" results: 71
[
1
2
3
4
5
]
6–8
Microscopic Characteristics of Mixtures
An Introduction to Chemical Mixtures (David R. Caprette, PhD)
colloid |
formula |
mixtures |
suspensions |
water |
solutions
Wilhelm Ostwald, Nobel Laureate in Chemistry in 1909, was one of the founders of modern physical chemistry. He is reported to have said, "There are no sharp differences between mechanical suspensions, colloidal solutions, and molecular [true] solutions. There is a gradual and continuous transition from the first through the second to the third."
A mixture, regardless of type, is described as "uniformly dispersed." This means that one or more minor components are evenly distributed throughout a major component. The major component is the substance that is present in the greatest proportion. In the biology laboratory, the major component often is a liquid, and minor components can be solids, other liquids, or even gases.
The "mechanical suspension" to which Ostwald referred is the easiest to describe. The minor component in a suspension is typically visible in an optical microscope and often is visible to the naked eye.
A colloidal mixture is sometimes called a colloidal system, a colloidal suspension, or simply a "colloid." The smallest dimension of the minor component of a colloidal mixture can range from approximately one nanometer (1 billionth of a meter) to one micrometer (1 millionth of a meter). Examples of liquid colloidal mixtures are milk, paints, and muddy water. The medium can be a gas, in the cases of smog, smoke, or aerosol sprays. Some solids are considered to be colloidal mixtures, as in steel or foam rubber.
In a true solution, one or minor components interact at the molecular level or ionic level with the major component. The minor components are atoms or molecules, and are not distinguishable in any optical microscope.
|
Infectious Disease Agents
Introduction to Infectious Diseases (Christine Herrmann, PhD)
bacteria |
eukaryote |
fungi |
helminths |
infectious disease |
microbes |
microbiology |
pathogen |
prokaryote |
protozoa |
viruses
Most disease-causing organisms, or pathogens, are too small to be seen without a microscope. Some (e.g., most viruses) are even too small to be visible under a light microscope and must be viewed with the more powerful electron microscope. Because of their microscopic size, these minute organisms often are referred to as microbes or microorganisms. The study of these organisms is called microbiology, and scientists who study these organisms are microbiologists. Not all microbes cause disease; many are beneficial and even essential. Bacteria, in the digestive system, for example are important partners in digestion. Microbes that cause disease are sometimes informally referred to as “germs” or “bugs”.
The five main groups of pathogens are bacteria, viruses, protozoa, fungi, and helminths. Bacteria are simple, single-celled organisms that lack an organized nucleus or membrane enclosed organelles. They often have a cell wall (prokaryotes), and their cells usually are rod-shaped or spherical. Commonly known diseases caused by bacteria are diarrheal diseases, pneumonia, strep throat, tuberculosis, and anthrax.
Viruses are particles of nucleic acid (DNA or RNA) surrounded by a protective coat that replicate within specific host cells and can spread from cell to cell. Infectious diseases caused by viruses include the flu, the common cold, AIDS, chickenpox, and hepatitis.
Protozoa are single-celled, motile, eukaryotic organisms, found in the Kingdom Protista, that can be human parasites. A protozoan known as Plasmodium (over 170 species), causes malaria, an infectious disease that is one of the world’s top killers.
Fungi are made of eukaryotic cells (organized nucleus and membrane enclosed organelles). All fungi, with the exception of the yeast group, are multi-cellular organisms that absorb nutrients from the environment. Fungi can cause athlete’s foot, sinusitis, skin diseases, and vaginal infections.
Helminths (worms and flukes) are invertebrate animals, some of which are parasitic. Wuchereia bancrofti is transmitted to humans by way of the mosquito. The mature adults pass into lymphatic glands, obstructing lymphatic drainage and resulting in a disfiguring condition, known as elephantiasis.
|
What Are Viruses?
Introduction to Viruses (Christine Herrmann, PhD)
DNA |
RNA |
protein |
reproduction |
parasite |
viruses
Viruses are submicroscopic particles that can be seen only with a powerful electron microscope. They are not cells, but consist of genetic material, either DNA or RNA, that is enclosed in a protective layer of protein. Viruses are able to enter certain host cells and, in fact, must invade a host cell to reproduce. Once inside living cells, viruses hijack cellular apparatuses necessary to make copies of themselves. For this reason, they are considered intracellular parasites. Viruses use the instructions contained in their genomes to produce virus components, both nucleic acid and proteins, which are then assembled to produce new virus particles. The new virus particles then can go on to infect other cells and continue the cycle of virus reproduction.
|
How Were Viruses First Discovered I?
Introduction to Viruses (Christine Herrmann, PhD)
Dimitri Ivanowsky |
Martinus Beijerinck |
Tobacco mosaic Virus |
infections agent |
viruses
In the late 1800s, filter apparatuses were devised that could remove bacteria (the smallest known organisms), from a liquid. It was not known at that time that smaller infectious agents existed that could pass through the filter. The Russian scientist, Dimitri Ivanowsky, studying the plant tobacco mosaic disease (TMV*), which affect plants, discovered that when he applied sap from infected tobacco leaves to the filter, the liquid that passed through still was infectious. However, he did not recognize that he had discovered a new type of infectious agent.
This insight was obtained six years later by the Dutch scientist, Martinus Beijerinck, who discovered that the infectious agent which passed through the filter could reproduce but would not grow on Petri dishes used to cultivate bacteria. He further realized that these agents required the presence of a host cell to reproduce. He named the agent responsible for tobacco mosaic disease a virus, after the Latin term for poison. He thought that this agent must be much smaller and simpler than bacteria. The subsequent crystallization and electron microscope images obtained by the American scientist, Wendell Stanley, in 1935 confirmed this, and the agent was named tobacco mosaic virus.
*Tobacco mosaic virus causes stunted plant growth and mottled, discolored plant leaves, especially in tobacco and other members of the tomato family (Solanceae).
|
How Are Viruses Studied?
Introduction to Viruses (Christine Herrmann, PhD)
electron transmission microscope |
genetics |
techniques |
viruses
With a few exceptions, viruses are too small (in the range of 10 to 200 nm) to be seen with a light microscope, so virologists use the more powerful electron transmission microscope to study them. The higher resolutions, facilitate identification of the type of virus and its structure. When there is a new outbreak of disease, such as during the 2003 SARS outbreak scientists can examine the unknown agent under an electron microscope and obtain clues about the virus with which they are dealing. Knowing the structure of a virus also is very helpful when designing drugs and vaccines to combat the agent.
Scientists prefer to be able to grow viruses in cell culture (cells derived from another organism and grown in controlled conditions), where it is much easier to study the virus. Some viruses, however, will not grow in cell culture using existing techniques (the techniques may work, but sometimes it takes awhile to find the right cell culture system). To study these viruses, virologists must infect susceptible animals to obtain enough of the agent to conduct their research.
Virologists study the genetics of viruses, how viruses cause disease, and how they interact with components within the host cell and the host’s immune system. Wherever possible, scientists also mutate viral genes to determine their functions in the virus life cycle. Using all these lines of research, virologists work to understand viruses, especially those which cause disease, and to gain information that can be applied to the design of antiviral drugs and vaccines. Particularly when working with potentially deadly viruses, virologists must adhere to strict safety procedures and perform manipulations in laboratories specially designed to contain the viruses.
|
Light Microscopy: Comparison of Optics
Light Microscopy: Comparison of Optics (David R. Caprette, PhD)
optics |
microscope |
microscopy
|
Types of Optics Compared
Light Microscopy: Comparison of Optics (David R. Caprette, PhD)
microscope |
microscopy |
optics
The best choice of optics depends on the specimen to be viewed. Specialized optics can give wonderfully detailed views of objects that are disappointing in bright field, but bright field often is a better choice. Bright field optics are usually-but not always-the best choice for viewing stained tissue.
A naturally pigmented specimen, such as Spirogyra may appear more dramatic with dark field or D.I.C. optics, but the cell divisions and chloroplasts are distinct in bright field, and the colors are true to nature. Phase contrast does not contribute additional information, and the halo that typically surrounds a specimen actually detracts from ideal contrast. On the other hand, phase contrast optics give the best view of spore-forming bacteria such as Bacillus thuringiensis. Dark field optics show the cell walls and spores with excellent resolution. To see such features in bright field, one must stop down the condenser aperture, causing distortion of the details.
Differential interference contrast does not do much for our views of a specimen such as Spirogyra or Bacillus. On the other hand, D.I.C. optics increase the depth of focus, making features of an object such as an amoeba very distinct even if they do overlap each other.
|
Bright Field Microscopy
Light Microscopy: Comparison of Optics (David R. Caprette, PhD)
microscope |
microscopy |
optics
Any light microscope requires a fairly intense light source, preferably built into the microscope and preferably with an intensity control. A typical light source is a tungsten lamp, which produces a yellowish light compared to daylight. On a good quality microscope, light passes through a blue or polarized filter to remove some of the light of yellow wavelength selectively, so that the colors we see are true colors.
Light from the source is collected by a component called a condenser, which serves to focus the light toward the specimen. By concentrating the light, the condenser increases the intensity of illumination. Lenses and/or devices in a condenser permit the use of specialized optics if they are available. On a bright field microscope, a device in the condenser, called an aperture diaphragm, allows a user to optimize contrast and resolution. With some microscopes, the position of the condenser is adjustable so that it can be centered in the light path or moved up and down.
The light path is through the condenser lens, directly through the specimen, and into an objective lens. The user can select from several objective lenses, adjust the condenser, and vary the intensity of illumination at the source.
The expression "bright field" refers to the fact that absorbance or scattering of light causes the object to show up against a bright background, called the field of view, or simply the field. The specimen absorbs light due to natural pigmentation, because we deliberately stain it, and/or because it is dense enough to scatter a significant amount of light. Many specimens, especially live specimens, are invisible or nearly so in a bright field microscope. Viewing them requires staining or the use of specialized optics. The first order of business, then, is to consider the amount of contrast you can expect from a given specimen, including whether or not it is stained or naturally pigmented.
|
Dark Field Microscopy
Light Microscopy: Comparison of Optics (David R. Caprette, PhD)
microscope |
microscopy |
optics
Dark field optics are very useful for finding a target, especially when the target is small, unstained, and/or moving. Organelles such as cilia, flagella, contractile vacuoles, and cell nuclei may be obscure or invisible in a bright field microscope. They show up readily in dark field, and with much better resolution than can be obtained using bright field optics. Dark field optics can resolve objects with diameters as little as 25 nanometers (1/40 of a micrometer), which is far superior to the resolution attainable using bright field optics.
Magnification is usually not a problem when looking for the specimen. The smallest known living things are the bacteria, and the smallest of bacteria can be seen at 40x total magnification, which is typically the lowest magnification on a compound microscope. The issue is contrast. Living bacteria are essentially invisible in bright field because they are too small to absorb or scatter sufficient light to be detected. Living bacteria are readily detected in dark field.
The term "dark field" refers to the fact that specimens appear as bright images against a nearly black background. To obtain dark field imaging, an opaque (occulting) disk is placed in the light path on the opposite side from the specimen. The disk blocks light from traveling directly through the condenser to the objective lens. The only light that can reach the condenser lens is light that passes around the edges of the occulting disk. For a given objective, the disk is sized so that light that does pass around the edges and is transmitted through the specimen cannot reach the objective lens.
Light that passes through a clear area of a specimen will travel in a fairly straight line and shoot right past the objective lens. If there is any object in the way, no matter how small, it will scatter some of the light. Some of the scattered light will be diverted into the objective lens, making the object visible as a bright object against a dark background. Because dark field optics rely on scattered light, one generally needs the maximum illumination intensity possible. Dark field should not be used for color determinations such as Gram stain interpretation, because scattered light will be of a different wavelength than the incident light. A true pink may appear purple, for example, and a purple stained object may appear pink or even gold colored.
|
Phase Contrast Microscopy
Light Microscopy: Comparison of Optics (David R. Caprette, PhD)
microscope |
microscopy |
optics
There is too little difference in transparency or color among most intracellular structures to enable them to be seen in a bright field light microscope. However, structures such as cell nuclei, cytoplasm, contractile vacuoles, cilia, and flagella differ markedly in refractive index. A phase contrast microscope causes images of such structures to differ in brightness, producing high contrast with similar resolution to that of a bright field instrument.
Light passing through an object with high refractive index is scattered so that the light path is longer than for objects that do not refract light as much. Scattered light also loses some velocity when traveling through the object. The maximum difference in path length between biological structures of low versus high refractive index typically is 1/4 of a wavelength. A phase contrast lens contains an element, called a "phase plate," that is matched to an annular diaphragm in the condenser. A hollow cone of light passes through the diaphragm, the condenser lens, and then through the specimen. Light that is not significantly scattered by the specimen passes through the central part of the phase plate, which does not alter the properties of the light. Highly scattered light passes through a ring in the phase plate with high refractive index, causing the light to lose another 1/4 wavelength.
The image comes to a focus at the back of the objective lens, where the altered light is recombined with the unobstructed light. Light that has been retarded a full 1/2 wavelength is completely out of phase with the unobstructed light, causing interference that shows up as a dark spot. Unscattered light recombines in phase and thus shows up as a bright spot. By centering the condenser so that the annular diaphragm is concentric with the phase plate, one can optimize the dynamic range (i.e., obtain maximum contrast in brightness among parts of a specimen with varying indexes of refraction). Organelles that are nearly or completely invisible in bright field often are strikingly apparent in phase contrast.
|
[
1
2
3
4
5
]
6–8
|
|